Journal: Journal of Translational Medicine
Article Title: Exploring the oncogenic potential of circSOD2 in clear cell renal cell carcinoma: a novel positive feedback loop
doi: 10.1186/s12967-024-05290-9
Figure Lengend Snippet: Authentication and characteristics of circSOD2 in RCC. A circSOD2 was verified by Sanger sequencing. The arrow indicates the back-splicing site of circ SOD2. CircSOD2 is derived by reverse splicing of exons 5, 6 and 7 of the SOD2 gene. B The expression of circSOD2 in RCC cells (769P, 786-O, A498, ACHN, and Caki-1) and human renal cortical proximal convoluted tubule epithelial cells (HK2). C qRT-PCR analysis of circSOD2 in the reverse transcription products using random primers or oligo dT primers. D The presence of circSOD2 was detected in 786-O and Caki-1 cells by qRT-PCR with convergent or divergent primers and validated by gel electrophoresis. GAPDH served as a control. E Comparison of circSOD2 expression in the nucleus and cytoplasm. F FISH analysis confirmed that circSOD2 was predominantly located in the cytoplasm. The nuclei were stained with DAPI. U6, 18S, and circSOD2 were labelled with Cy3. G Stability of circSOD2 and linear SOD2 was assessed by Actinomycin D treatment, followed by qRT-PCR at different time points. H Stability of circSOD2 and linear SOD2 was assessed by RNase treatment, followed by qRT-PCR. (NS, nonsignificant; * P < 0.05; ** P < 0.01; *** P < 0.001; **** P < 0.0001)
Article Snippet: Specifically, Human RCC cell lines 786-O, 769P, Caki-1, A498, ACHN and human renal proximal tubular epithelial cell line HK2 were purchased from American Type Culture Collection (ATCC).
Techniques: Sequencing, Derivative Assay, Expressing, Quantitative RT-PCR, Reverse Transcription, Nucleic Acid Electrophoresis, Control, Comparison, Staining